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- JAL-2337
Refactor/refine graphics printing to cope with single or split graphics outputs - JAL-2335
Incorrect jaccard distance computed for features representing pairwise contacts - JAL-2333
Select columns containing feature incorrect for Disul(f|ph)ide Bond features - JAL-2332
Cannot open structure chooser for hen lysozyme (Uniprot P00698) - JAL-2327
Add isContactFeature property to SequenceFeature - JAL-2325
Release 2.10.1 - JAL-2324
SequenceFeature.equals() fails if score is Float.NaN - JAL-2323
Colour structure by sequence incorrect for Disul(f|ph)ide Bond features - JAL-2322
Unify architecture for data + html exporting to suit various exports (SVG, BioJS, etc) - JAL-2320
Close Jalview Chimera Viewer if user shuts down Chimera - JAL-2319
View Mappings has ranges swapped for SIFTS mappings, and mappings are made to 'Not_Observed' residue - JAL-2318
Update help page for Above PID colour scheme - JAL-2317
No structure mapping made for some structures when loaded in Chimera - JAL-2315
Cannot delete final link in the URL links Connections Preferences dialog - JAL-2312
Repeated mapping generated from SIFTS - JAL-2309
Unit test failures: jalview.bin.CommandLineOperations - JAL-2308
Unit test failure: jalview.io.JSONFileTest - JAL-2302
Only report the maximal match set for a Find pattern - JAL-2301
Threonine (T) is reported as !hydrophobic in Conservation, should be hydrophobic - JAL-2292
Sequence to structure mapping missing for lower case residues - JAL-2287
dialog warning about disconnecting chimera session allows disconnect to be cancelled - JAL-2286
Colour schemes don't handle 'joint consensus' correctly - JAL-2284
Command line argument to export BioJS MSA - JAL-2282
URL link from sequence ID adds extra link incorporating sequence name - JAL-2281
URL link from sequence ID should match database cross references regardless of case of the database name - JAL-2280
dropping a CIF file onto a similarly named sequence doesn't associate 3D structure - JAL-2277
new HTML export is buggy in wrapped mode - JAL-2272
CTRL-click on selection to obtain Selection menu does not work on El-Capitan - JAL-2197
Distinguish between JNet and JPred in UI components for running MSA based or per-sequence predictions - JAL-2196
Better encapsulation of PDBEntry properties - JAL-2177
Update Jmol to latest version n: 14.6.n - JAL-1961
Fix broken link to GFF format - JAL-1738
Ability to create a selection from highlighted region (e.g. "highlight from structure") - JAL-1723
Sort DBRefEntry items alphabetically for ease of viewing - JAL-98
conservation / consensus out of memory
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