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  1. Jalview
  2. JAL-2890

Add support for CIPRES web service

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    Details

    • Type: New Feature
    • Status: Ready for testing
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.10.3_archeopteryx
    • Fix Version/s: None
    • Component/s: web service request
    • Labels:
      None

      Description

      CIPRES (http://www.phylo.org/index.php/) offers access to numerous advanced algorithms for phylogenetic tree inference. Adding it as a web service to Jalview using CIPRES' REST API will make Jalview capable of offering these algorithms to users for tree calculations.

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          Issue Links

          blocks

          New Feature - A new feature of the product, which has yet to be developed. JAL-2802 Implement IQ-TREE as a web service

          • Major - Major loss of function.
          • Open

          New Feature - A new feature of the product, which has yet to be developed. JAL-2803 Implement BEAST 2 as a web service

          • Major - Major loss of function.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2800 Expand tree calculation dialog window algorithm choices

          • Major - Major loss of function.
          • In Progress
          related with

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2891 Add Jalview as an umbrella application to CIPRES

          • Major - Major loss of function.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2801 Add sets of default parameters for tree calculating

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Open

            Activity

              People

              Assignee:
              kjvdheide Koen van der Heide
              Reporter:
              kjvdheide Koen van der Heide
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                Dates

                Created:
                Updated: