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  1. Jalview
  2. JAL-2794

Reflect node selections in the new Aptx tree viewer back onto the Jalview alignment

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    Details

    • Type: Task
    • Status: Ready for testing
    • Priority: Critical
    • Resolution: Unresolved
    • Affects Version/s: 2.10.3_archeopteryx
    • Fix Version/s: None
    • Component/s: None
    • Labels:
      None

      Description

      The current Jalview tree viewer allows the user to select tree nodes, this selection will then be highlighted/coloured on the original alignment. The new archaeopteryx viewer will need this functionality as well.

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          Issue Links

          blocks

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2806 Link independent Aptx tree views originating from the same MSA together

          • Major - Major loss of function.
          • Ready for testing
          related with

          Task - A task that needs to be done. JAL-2817 Loading existing trees into Archaeopteryx binds the tree sequences to the alignment

          • Major - Major loss of function.
          • Ready for testing

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2826 Reflect collapsing of nodes in tree view back onto alignment

          • Major - Major loss of function.
          • Ready for testing
          mentioned on

          GitLab Commit - JAL-2794 Highlight only the annotation leaves in the selection

          GitLab Commit - JAL-2794 Install forester's found-node set before a leaf click

          GitLab Commit - JAL-2794 Install forester's found-node set before a leaf click

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              People

              Assignee:
              kjvdheide Koen van der Heide
              Reporter:
              kjvdheide Koen van der Heide
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                Dates

                Created:
                Updated: