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- JAL-913
Docuementation for new RNA features - JAL-905
sequence associated alignment annotation not added to an alignment is not saved to project - JAL-897
arrows from different stems in same direction are not marked as distinct - JAL-896
Arrows for proximal stems in different directions run together - JAL-892
store varna window state in jalview project - JAL-891
Adapt the existing sequence logo to visualize base-pair interactions - JAL-890
alignment annotation ID popup menu not displaying row specific annotation for rna structure conservation row - JAL-885
Structure Conservation Row - JAL-883
'Stem arrows' of secondary structures are not redrawn properly - JAL-882
Jalview can not visualize non-standard gaps with VARNA - JAL-880
Saving and Loading Jalview project state generates errors with RNA consensus secondary structure - JAL-851
sequence database accessions not imported when fetching alignments from Rfam - JAL-842
Integrate a VARNA window in Jalview gui - JAL-841
Jalview can not export and import again RNA secondary structure annotation - JAL-826
merge jalview 2.5.1_rna with 2.7 branch
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