Details
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Type: Bug
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Status: Resolved
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Priority: Major
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Resolution: Fixed
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Affects Version/s: None
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Fix Version/s: 2.7_gsoc11
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Labels:None
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Environment:Gentoo Linux
Description
VARNA is not able to handle gaps different from ".", "-" and ":". Therefore a method to replace everything that is not a bracket "([{<" was created and called everywhere where a structure is handed over to the VARNA RNA class.
We have to reconsider this when it is clear if VARNA will stay with such a gap handling or not.
We have to reconsider this when it is clear if VARNA will stay with such a gap handling or not.