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  1. Jalview
  2. JAL-4528

Allow calculation of annotation track based trees involving just one or two sequences

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    Details

    • Type: Improvement
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: 2.11.5.0
    • Component/s: analysis
    • Labels:
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      Description

      Jalview's tree calculation dialog currently prevents people analysing sequences with 3 or more secondary structure tracks because it only considers the number of sequences being analysed. It should instead consider the number of available Secondary structure annotation rows when the secondary structure score model is selected.

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          blocks

          New Feature - A new feature of the product, which has yet to be developed. JAL-4386 Calculate tree using secondary structure annotation

          • Blocker - Blocks development and/or testing work, production could not run.
          • In Progress
          depends on

          Improvement - An improvement or enhancement to an existing feature or task. JAL-4527 Allow secondary structure rows with 'PROVIDER' metadata to be exported and imported as Jalview annotations file

          • Blocker - Blocks development and/or testing work, production could not run.
          • Open
          mentioned on

          GitLab Commit - JAL-4527 JAL-4528 - workaround check for minimum number of sequences when...

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: