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  1. Jalview
  2. JAL-3895

Alphafold red/orange/yellow/green colourscheme for structures

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.11.2.0
    • Fix Version/s: 2.11.2, 2.11.3.0
    • Component/s: annotation, Structures
    • Labels:
      None

      Description

      Model Confidence - measured as pLDDT is interpreted as:
       Very high (pLDDT > 90) - dark blue
       Confident (90 > pLDDT > 70) - light blue
       Low (70 > pLDDT > 50) - yellow
       Very low (pLDDT < 50) - orange

        Attachments

          Issue Links

          blocks

          Improvement - An improvement or enhancement to an existing feature or task. JAL-3914 Import model reliability scores encoded as temperature factor annotation with their correct name and semantics

          • Major - Major loss of function.
          • In Progress
          related with

          Improvement - An improvement or enhancement to an existing feature or task. JAL-4303 annotation colouring should allow switch between 'use alignment colours' and 'use colour from annotation'

          • Critical - Crashes, loss of data, severe memory leak.
          • Open

          New Feature - A new feature of the product, which has yet to be developed. JAL-1556 select and/or colour by annotation popup menu items

          • Critical - Crashes, loss of data, severe memory leak.
          • Closed

            Activity

              People

              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated:
                Resolved: