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  1. Jalview
  2. JAL-3748

CDS alignment doesn't match original CDS when aligning protein products

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    Details

    • Type: Bug
    • Status: Being tested
    • Priority: Critical
    • Resolution: Unresolved
    • Affects Version/s: 2.11.1.0, 2.11.1.1, 2.11.1.2
    • Fix Version/s: 2.11.2, 2.11.1.3
    • Component/s: cds/protein, na
    • Labels:

      Description

      Unclear how many ENA entries are affected by this as yet! Ideally this should be fixed ASAP as a patch release if it can.

      1. Import MN908947
      2. Show EMBLCDSPROTEIN crossrefs
      3. Align the proteins shown with any alignment service.
      4. The resulting alignment appears to have the correct 'ranges' for CDS, but the CDS sequences are not correct.

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              Assignee:
              soares Ben Soares
              Reporter:
              jprocter Jim Procter
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                Dates

                Created:
                Updated: