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  1. Jalview
  2. JAL-3700

Complement sequence correspondence is broken for CDS with shared dataset sequence

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    Details

    • Type: Bug
    • Status: Resolved
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.11.1.0, 2.11.1.1, 2.11.1.2
    • Fix Version/s: 2.11.2, 2.11.1.3
    • Component/s: cds/protein, jvdesktop
    • Labels:
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      Description

      Fetch J03321 from EMBL and Get Cross-References | UNIPROT to see CDS and protein split frame view.
      Selecting sequence(s) in the CDS panel results in selection of the first peptide (only) in the complement whose dataset sequence maps to that of the selection, rather than the protein product(s) corresponding to the selected. That is, selecting any CDS other than AAA91568.1 selects P0CE19. (AAA91568 is from reverse strand CDS, so has a new dataset sequence generated, and is not affected by this bug.)

      Propagation of protein selections to CDS is similarly broken.

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              Assignee:
              soares Ben Soares
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated: