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  1. Jalview
  2. JAL-1767

Save PCA viewer in Jalview Projects

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Critical
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.11.0
    • Component/s: file format issue, gui, jvdesktop
    • Labels:
      None

      Description

      Versions 2.8 and earlier have no support for storing the PCA view created for an alignment. Since these are costly to calculate, and often useful for downstream analysis, we should provide the option to store them within the project file so they can be returned to at a later date.

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          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-1786 Save ongoing and complete jobs in Jalview Projects

          • Major - Major loss of function.
          • Open
          depends on

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2962 Remove 'Change Parameters' options from PCA panel

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Closed
          related with

          Task - A task that needs to be done. JAL-3063 Migrate from Castor to JAXB to enable Jalview project import/export in Jalview-js

          • Major - Major loss of function.
          • Reopened

          New Feature - A new feature of the product, which has yet to be developed. JAL-2647 Storage of input data + score model/parameters for tree and PCA

          • Major - Major loss of function.
          • In Progress

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated:
                Resolved: