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  1. Jalview
  2. JAL-953

ensure that all RNA associated visualization options are hidden or disabled when handling protein or when secondary structure annotation is absent

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    Details

    • Type: Task
    • Status: Open
    • Priority: Blocker
    • Resolution: Unresolved
    • Affects Version/s: 2.5.1_rna, 2.8
    • Fix Version/s: None
    • Component/s: awt-gui, gui
    • Labels:

      Description

      The jalview gui should only show options relevant to the data present on the alignment. if there is no RNA secondary structure data, then the 'colour by rna helices' option should be disabled, and nucleotide colourschemes should only be available for nucleotide alignments.

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          related with

          Task - A task that needs to be done. JAL-826 merge jalview 2.5.1_rna with 2.7 branch

          • Major - Major loss of function.
          • Resolved

          Bug - A problem which impairs or prevents the functions of the product. JAL-2405 Protein specific colours enabled in selected group colour menu for nucleotide alignment

          • Major - Major loss of function.
          • Closed

          Bug - A problem which impairs or prevents the functions of the product. JAL-4232 RNA specific services are enabled for protein sequences.

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Ready for testing

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1451 do not apply default colourscheme if not compatible with sequence type

          • Major - Major loss of function.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1801 change protein structure specific selection query when working with RNA

          • Major - Major loss of function.
          • Open

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: