Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-4435

Label sequence groups and tree internal nodes with diversity information

    XMLWordPrintable

    Details

    • Type: New Feature
    • Status: In Progress
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.11.4.0
    • Fix Version/s: 2.11.5.0
    • Component/s: annotation, trees
    • Labels:
      None

      Description

      Work on JAL-4386 demonstrated creating multiple nodes for a sequence, one for each secondary structure annotation track, is useful when exploring the differences between different sources of truth for secondary structure (ie experiment, AlphaFold, SWISS-MODEL, etc) across a family of proteins.

      Jalview's tree viewer and the sequence groups it creates could be enhanced to report summaries of those sources of truth - e.g. one branch only contains alphafold predictions, another only contains PDB and SWISS-MODEL predictions.

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              reniacorreya Renia Correya
              Reporter:
              jprocter James Procter
              Votes:
              0 Vote for this issue
              Watchers:
              1 Start watching this issue

                Dates

                Created:
                Updated: