[JAL-4411] Record source metadata in 3D structure data derived/transferred annotation rows - Jalview

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Type: Task
Status: Resolved
Priority: Major
Resolution: Unresolved
Affects Version/s: None
Fix Version/s: 2.11.4.0, 2.11.5.0
Component/s: Datamodel, Structures
Labels:
None

Sprint:
2.11.5.0 alpha

Description

Structure derived annotation rows need to be clearly annotated both with the originating structure data, and metadata such as the type of structure (experimental, predicted by deep learning, template, etc).

Attachments

Issue Links

blocks

JAL-4548 showing PDB IDs and other important metadata for annotations in the alignment and tree views

In Progress

related with

JAL-4227 Support Rfam 2020 style per sequence secondary structure lines in stockholm files

Open

mentioned on

Commit - JAL-4386 JAL-4411 factored out the test for a particular annotation row being...

Commit - JAL-4411 Bug fix

Commit - JAL-4411 catch cases when 'ssStructFilePathNameInPDB' is null - this happens...

Commit - JAL-4411 Fix and test for record source metadata in annotation rows

Commit - JAL-4411 Fixed some test cases

Commit - JAL-4411 handle Boolean from String when Jalview projects imported

Commit - JAL-4411 Record source metadata in derived/transferred annotation rows

Commit - JAL-4548 JAL-3880 JAL-4411 Code refactoring

Commit - JAL-4548 JAL-4411 JAL-3880 transfer metadata from PDBEntry to all derived...

(7 mentioned on)

Activity

People

Assignee:: Renia Correya

Reporter:: James Procter

Votes:: 0 Vote for this issue

Watchers:: 2 Start watching this issue

Dates

Created:: 10/May/24 3:39 PM

Updated:: 26/Jun/25 3:50 PM