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  1. Jalview
  2. JAL-3419

Roundtrip of feature 'otherDetails' via gff format

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Duplicate
    • Affects Version/s: 2.11.0
    • Fix Version/s: None
    • Component/s: sequencefeatures
    • Labels:
      None

      Description

      Currently export of features as gff3 only populates column 9 "attributes" from the special "ATTRIBUTES" entry in the SequenceFeature.otherDetails map. Writing out other entries from this map would give better round trip capability.

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          Issue Links

          duplicates

          Improvement - An improvement or enhancement to an existing feature or task. JAL-3121 Allow export/import of map-value feature attributes via GFF3

          • Blocker - Blocks development and/or testing work, production could not run.
          • Closed
          related with

          Task - A task that needs to be done. JAL-2330 Document what is/not supported by Jalview for GFF file input / output

          • Major - Major loss of function.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2927 Export Feature Description in GFF

          • Critical - Crashes, loss of data, severe memory leak.
          • In Progress

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              Assignee:
              jprocter James Procter
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated:
                Resolved: