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  1. Jalview
  2. JAL-3193

Update Jalview for merge of Ensembl and EnsemblGenomes REST services

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    Details

    • Type: Task
    • Status: In Progress
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: 2.11.1
    • Component/s: data retrieval services
    • Labels:
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      Description

      Ensembl have announced that they plan to merge Ensembl and EnsemblGenomes REST services, end of March or early April. Further details to be given in a future blog post.
      http://www.ensembl.info/2019/02/07/whats-coming-in-ensembl-96-ensembl-genomes-43/

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          related with

          New Feature - A new feature of the product, which has yet to be developed. JAL-2786 Custom taxon lists for ensemblGenomes gene id lookup

          • Critical - Crashes, loss of data, severe memory leak.
          • Open

          New Feature - A new feature of the product, which has yet to be developed. JAL-2755 Load VCF to CDS cross-ref from protein

          • Critical - Crashes, loss of data, severe memory leak.
          • Ready for testing

          Task - A task that needs to be done. JAL-2950 Resolve correct Ensembl REST API endpoint for Uniprot crossreferences to Ensembl

          • Major - Major loss of function.
          • Open

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated: