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  1. Jalview
  2. JAL-2668

HMM visualisation and MSA analysis

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    Details

    • Type: Epic
    • Status: In Progress
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: 2.10.3_hmm, 2.12.0
    • Component/s: analysis, renderer
    • Labels:
      None
    • Epic Name:
      HMMvisualisation

      Description

      Implementation of file IO, datamodel, renderer, analysis and UI components for importing, exporting, and viewing hidden markov models.

        Attachments

          Issue Links

          related with

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-1366 Alignment visualizations with respect to reference sequences and profiles

          • Major - Major loss of function.
          • Open

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-4400 Secondary and tertiary structure based profile visualisation and analysis

          • Major - Major loss of function.
          • Open

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-2629 HMMER Command Implementation

          • Major - Major loss of function.
          • In Progress

          Task - A task that needs to be done. JAL-2616 Analysis of HMMer model emission probability distribution

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Open

            Activity

              People

              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: