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  1. Jalview
  2. JAL-1951

Nexus support

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    Details

    • Type: New Feature
    • Status: In Progress
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: None
    • Labels:
      None

      Description

      David Booth writes:

      "The biggest file format support that would be great, is really the nexus format, as it plugs directly into MrBayes/Mesquite. Not sure if you guys are working on that though."

      Refs:
      http://wiki.christophchamp.com/index.php/NEXUS_file_format
      http://sysbio.oxfordjournals.org/content/46/4/590.short
      https://en.wikipedia.org/wiki/Nexus_file#References

        Attachments

          Issue Links

          is duplicated by

          New Feature - A new feature of the product, which has yet to be developed. JAL-2805 Support loading in existing trees in the major tree file formats

          • Major - Major loss of function.
          • Ready for testing
          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-110 Extend Tree Viewer to support richer treefile formats

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Ready for testing

          Bug - A problem which impairs or prevents the functions of the product. JAL-2868 Archaeopteryx still attempts to load invalid files

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Open

          Task - A task that needs to be done. JAL-2883 Enrich sequence data passed between Forester and Jalview

          • Major - Major loss of function.
          • Open

            Activity

              People

              Assignee:
              kjvdheide Koen van der Heide
              Reporter:
              dzbooth David Booth
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                Dates

                Created:
                Updated: