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  1. Jalview
  2. JAL-1395

make core PDB parsing code independent of Jmol library availability

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    Details

    • Type: Improvement
    • Status: Reopened
    • Priority: Blocker
    • Resolution: Incomplete
    • Affects Version/s: 2.8.1, 2.8.2
    • Fix Version/s: 2.9
    • Component/s: awt-gui, Dev and Dep, Structures
    • Labels:
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      Description

      The use of the Jmol parser in PDB parsing blocks compilation (JAL-1394) which prevents JAL-1213 coming into a release or development branch. Workaround is to use reflection to launch JMol PDB parser.

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          blocks

          Bug - A problem which impairs or prevents the functions of the product. JAL-1394 JalviewLite needs JmolApplet and JmolData jar dependencies

          • Major - Major loss of function.
          • Closed

          New Feature - A new feature of the product, which has yet to be developed. JAL-1213 use Jmol data api to parse and process structure data

          • Major - Major loss of function.
          • Closed

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated:
                Resolved: