Details
Description
A submenu option is needed to show or hide all the sequence associated alignment annotation for the current sequence, sequence selection, or for the whole alignment.
Key functions needed:
* control which kinds of sequence associated annotation are shown on the alignment
- secondary structure from structure
- secondary structure from prediction method
- disorder from one or many prediction methods
-> The alignment annotation has a 'CalcID' field which can be used to determine what created the annotation, but currently, there are no human readable look up tables that could be used to display a descriptive string for a particular CalcID.
-> older Jalview annotation datasets do not have a CalcID field (particularly those created by external applications). Here, we can hide/show annotation according to label (the string shown in the annotation ID panel),
* sorting and reordering annotation
- there are no annotation sorting modes provided at the moment, but these are now needed:
. show similar types of annotation (secondary structure, disorder) together or grouped by sequence/sequence group
Key functions needed:
* control which kinds of sequence associated annotation are shown on the alignment
- secondary structure from structure
- secondary structure from prediction method
- disorder from one or many prediction methods
-> The alignment annotation has a 'CalcID' field which can be used to determine what created the annotation, but currently, there are no human readable look up tables that could be used to display a descriptive string for a particular CalcID.
-> older Jalview annotation datasets do not have a CalcID field (particularly those created by external applications). Here, we can hide/show annotation according to label (the string shown in the annotation ID panel),
* sorting and reordering annotation
- there are no annotation sorting modes provided at the moment, but these are now needed:
. show similar types of annotation (secondary structure, disorder) together or grouped by sequence/sequence group