Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-893

upgrade varna to version that supports version independent state storage/retrieval

    XMLWordPrintable

    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Blocker
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.9
    • Component/s: None
    • Labels:
      None

      Description

      The current version of VARNA (3.8b) introduced into Jalview 2.7.x, and all versions prior, use a java object serialization to store a snapshot of the current datamodel and visual display settings. These serializations are not backwardly compatible, so cannot be used to save the state of the VARNA display within a jalview project archive.

      Once a version - independent mechanism is available, the version of VARNA used by jalview should be upgraded and Jalview2XML extended to support the use of this mechanism to save the layout and visual attributes of a VARNA display embedded within Jalview.

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              jprocter James Procter
              Votes:
              0 Vote for this issue
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: