[JAL-4489] automatic clustering of sequences using distance matrices - Jalview

XML

Word

Printable

Details

Type: New Feature
Status: Open
Priority: Major
Resolution: Unresolved
Affects Version/s: None
Fix Version/s: 2.11.5.0
Component/s: analysis
Labels:
None

Description

initially look at dbscan!

Attachments

Issue Links

mentioned on

Commit - JAL-4489 JAL-4159 combine calculation, model and UI code for PaSiMap and PCA

Commit - JAL-4489 JAL-4159 combine calculation, model and UI code for PaSiMap and PCA

Commit - JAL-4489 organise imports

Commit - JAL-4489 pulled up duplicated code from PCA and PaSiMap and added new clustering dropdown menu

Commit - JAL-4489 simple dbscan implementation (rather than the one in commons-math !)

Commit - JAL-4489 simple wrapper for running dbscan with a matrix

(1 mentioned on)

Activity

People

Assignee:: James Procter

Reporter:: James Procter

Votes:: 0 Vote for this issue

Watchers:: 2 Start watching this issue

Dates

Created:: 07/Nov/24 1:19 PM

Updated:: 10/Jan/25 4:19 PM