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  1. Jalview
  2. JAL-389

FASTA file with sequence IDs beginning 'P1;' confuses IdentifyFile

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: 2.4
    • Fix Version/s: None
    • Component/s: file format issue
    • Labels:

      Description


      Import the following file

      >P1;myprotein
      ACD
      >P1;anotherprotein
      EBA

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          Issue Links

          related with

          Task - A task that needs to be done. JAL-678 test PIR/FASTA/BLC file type recognition and IO of metadata associated with sequences (viz. the Modeler description lines)

          • Major - Major loss of function.
          • Open

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-2445 More robust parser selection strategy for input data

          • Major - Major loss of function.
          • Open

          Bug - A problem which impairs or prevents the functions of the product. JAL-706 BLC files from stamp not being parsed correctly

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Open

            Activity

              People

              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: