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  1. Jalview
  2. JAL-3578

Groovy script to compute peptide variants from codon variants

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    Details

    • Type: Task
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.11.1
    • Fix Version/s: 2.11.1.0
    • Component/s: analysis
    • Labels:
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    • Urgency:
      Highest

      Description

      Jalview 2.11 computed and added derived peptide variants from codon variants, Jalview 2.11.1 doesn't, instead shows codon variants virtually, and computes peptide consequences on the fly only. This removes the ability to colour or filter by the peptide variants.

      Pending a change to the application to meet this need, provide a Groovy script to do it.

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Updated:
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