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  1. Jalview
  2. JAL-3489

Not all chains mapped for multimeric structure loaded from file

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    Details

    • Type: Bug
    • Status: Ready for testing
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.11.0
    • Fix Version/s: 2.11.2
    • Component/s: jvdesktop, Structures
    • Labels:
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      Description

      Configure map with SIFTS in Preferences | Structure (either Jmol or Chimera).
      Fetch P30419 from Uniprot and 3D Structure Data... From file... choose 506h.cif (attached) as a local file.
      Sequence is only mapped to chain A of the structure.
      Compare fetching 506h from PDB when sequence is mapped to chains A and B (as wanted).

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          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-2691 Not all chains are mapped when multimeric assemblies are imported via CIF file

          • Major - Major loss of function.
          • Closed

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2694 detect and map duplicate chains for biological assemblies

          • Major - Major loss of function.
          • Open

          Bug - A problem which impairs or prevents the functions of the product. JAL-3355 Not all structure chain mappings restored from Jalview project

          • Critical - Crashes, loss of data, severe memory leak.
          • In Progress

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated: