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  1. Jalview
  2. JAL-3390

Option to hide unmapped residues in structure viewer

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    Details

    • Type: New Feature
    • Status: Ready for testing
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.11.2
    • Fix Version/s: 2.11.3
    • Component/s: Structures
    • Labels:

      Description

      Would like the option to hide regions of 3d structure with no mapping to the visible region of the alignment.
      This would allow the structure viewer display to match an alignment which has been restricted to a domain of interest.

      Would like the option to either hide hidden mapped regions in structure viewer, or show gray (as at present).

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          Issue Links

          blocks

          Bug - A problem which impairs or prevents the functions of the product. JAL-3404 View | Show Chain... incorrect for Chimera

          • Major - Major loss of function.
          • Ready for testing

          Improvement - An improvement or enhancement to an existing feature or task. JAL-3400 Include sequence name in Structure Viewer View Chain submenu items

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Ready for testing
          is duplicated by

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1414 hide all but mapped coordinates in Jmol view

          • Major - Major loss of function.
          • Closed
          related with

          New Feature - A new feature of the product, which has yet to be developed. JAL-3391 Don't offer structures with no mapping to visible sequence

          • Major - Major loss of function.
          • Closed

          Improvement - An improvement or enhancement to an existing feature or task. JAL-3518 Abstract API for structure viewer commands

          • Major - Major loss of function.
          • Closed

            Activity

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              Assignee:
              Unassigned Unassigned
              Reporter:
              geoff.barton Geoff Barton
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                Dates

                Created:
                Updated: