Details
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Type:
Bug
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Status: Being tested
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Priority:
Major
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Resolution: Fixed
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Affects Version/s: 2.10.5, 2.11.0, 2.11.1, 2.11.2.0
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Fix Version/s: 2.11.2
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Component/s: file format issue, sequencefeatures
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Labels:
Description
Most likely affects earlier versions of Jalview.
Import a sequence feature file or GFF containing non-pos features (ie start==end==0) in a particular group:
STARTGROUP uniprot
Nonepositional FER1_PEA -1 0 0 NONPOS 0.0
ENDGROUP uniprot
then export - the resulting file is:
Nonepositional FER1_PEA -1 0 0 NONPOS 0.0
Group delimiters are only output if there are positional features. GFF output is not affected since the group is output in the method column.
Import a sequence feature file or GFF containing non-pos features (ie start==end==0) in a particular group:
STARTGROUP uniprot
Nonepositional FER1_PEA -1 0 0 NONPOS 0.0
ENDGROUP uniprot
then export - the resulting file is:
Nonepositional FER1_PEA -1 0 0 NONPOS 0.0
Group delimiters are only output if there are positional features. GFF output is not affected since the group is output in the method column.
