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  1. Jalview
  2. JAL-2879

Save a map-valued feature attribute in Jalview project

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    Details

    • Type: New Feature
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: None
    • Fix Version/s: 2.11.0
    • Component/s: Datamodel
    • Labels:
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      Description

      SequenceFeature.otherDetails is a Map<String, Object> to hold feature attributes. The 'toString()' value of each attribute is saved to the Jalview project. This is insufficient to save and restore an attribute which has sub-attributes, for example the CSQ (consequence) data provided by VEP (variant effect predictor).

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          blocks

          Task - A task that needs to be done. JAL-2843 Provide persistence for filter or colour by feature attribute

          • Major - Major loss of function.
          • Closed
          related with

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2835 Support visualisation of VEP (variant effect predictor) data

          • Major - Major loss of function.
          • Closed

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Created:
                Updated:
                Resolved: