Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-2772

ArrayIndexOutOfBoundsException in findFeatures

    XMLWordPrintable

    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.10.3
    • Fix Version/s: 2.10.3
    • Component/s: Datamodel
    • Labels:

      Description

      Fetch sequences, choose PDB and retrieve 3a6s:

      Exception in thread "Thread-15" java.lang.ArrayIndexOutOfBoundsException: 124
      at jalview.datamodel.Sequence.findFeatures(Sequence.java:1830)
      at jalview.controller.AlignViewController.findColumnsWithFeature(AlignViewController.java:246)
      at jalview.controller.AlignViewController.markColumnsContainingFeatures(AlignViewController.java:178)
      at jalview.gui.AlignFrame.hideFeatureColumns(AlignFrame.java:5525)
      at jalview.gui.SequenceFetcher.parseResult(SequenceFetcher.java:1021)
      at jalview.gui.SequenceFetcher.run(SequenceFetcher.java:786)
      at java.lang.Thread.run(Thread.java:745)

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              kmourao Kira Mourão
              Votes:
              0 Vote for this issue
              Watchers:
              2 Start watching this issue

                Dates

                Created:
                Updated:
                Resolved: