Details
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Type:
Bug
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Status: Closed
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Priority:
Minor
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Resolution: Fixed
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Affects Version/s: 2.8, 2.10.1
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Fix Version/s: 2.10.2
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Component/s: jvdesktop, jvlite, selection, sequencefeatures
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Labels:None
Description
If Sort by Feature Density (or Score) is on a selection region, and the region includes trailing spaces, then features to the right of the region may be counted.
Example: uniref50.fa + exampleFeatures.txt.
Select columns 8-10 (only FER1_MAIZE has 1 feature) and Sequence sort by Density in Feature Settings. Sure enough FER1_MAIZE sorts to the bottom (or the top on a second, inverting sort).
Now insert one ore more gaps before the first features in FER1_SPIOL (at column 11).
Widen the selection region to include one or more of the gapped columns (but not the SPIOL features).
Sort by Density again - FER1_SPIOL is now sorted to bottom / top.
Example: uniref50.fa + exampleFeatures.txt.
Select columns 8-10 (only FER1_MAIZE has 1 feature) and Sequence sort by Density in Feature Settings. Sure enough FER1_MAIZE sorts to the bottom (or the top on a second, inverting sort).
Now insert one ore more gaps before the first features in FER1_SPIOL (at column 11).
Widen the selection region to include one or more of the gapped columns (but not the SPIOL features).
Sort by Density again - FER1_SPIOL is now sorted to bottom / top.
