Details
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Type: Improvement
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Status: Open
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Priority: Major
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Resolution: Unresolved
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Affects Version/s: 2.10.1, 2.10.2
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Fix Version/s: 2.11.0
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Component/s: Structures
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Labels:
Description
If sequences are named according to PDB IDs, the 3D structure chooser provides perfect matches to the PDB, but in 2.10.1, hitting the 'View' button causes Jalview to perform a 'Fetch standard DB References' for the sequences, before finally downloading the PDB IDs. This can take some time, and seems pointless since the appropriate IDs are already shown in the structure chooser.
Before trying the 'Fetch standard DB References' process, if PDB accessions were discovered based on sequence IDs, Jalview should try to match those first.
Before trying the 'Fetch standard DB References' process, if PDB accessions were discovered based on sequence IDs, Jalview should try to match those first.
Attachments
Issue Links
- related with
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JAL-2039 Allow user to view 'Cached PDB files' for an alignment immediately
- Closed