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  1. Jalview
  2. JAL-2379

Improve PCA memory management

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: 2.10.1
    • Fix Version/s: 2.10.2
    • Component/s: jvdesktop
    • Labels:

      Description

      Investigate possible improvements to the memory footprint of the PCA calculation.

        Attachments

          Issue Links

          blocks

          New Feature - A new feature of the product, which has yet to be developed. JAL-2393 Custom substitution matrices provided via groovy script

          • Major - Major loss of function.
          • In Progress
          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-613 unhandled Out of Memory Error when viewing pca analysis results

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Resolved

          Task - A task that needs to be done. JAL-2397 Correct PCA (Jalview/SeqSpace) and substitution matrix based tree treatment of gap scores

          • Major - Major loss of function.
          • Closed

            Activity

              People

              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated:
                Resolved: