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  1. Jalview
  2. JAL-2205

Improve efficiency of datamodel for handling locus datasets

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    Details

    • Type: Improvement
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: Datamodel
    • Labels:
      None

      Description

      Importing genes via the Ensembl fetcher can take considerable time (try e.g. 'fox1'). Superficial profiling suggests rate limiting steps include the import and normalisation of features.

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          blocks

          New Feature - A new feature of the product, which has yet to be developed. JAL-1705 Ensembl sequence fetching

          • Major - Major loss of function.
          • Closed
          related with

          Epic - Created by Jira Software - do not edit or delete. Issue type for a big user story that needs to be broken down. JAL-2446 Add NCList data structure to Jalview

          • Major - Major loss of function.
          • Closed

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: