Details
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Type: Bug
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Status: Open
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Priority: Major
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Resolution: Unresolved
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Affects Version/s: 2.10.0
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Fix Version/s: None
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Component/s: data retrieval services
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Labels:
Description
Fetching ENA record M12975 results in ENA AH002001. However, since M12975 is not added to the returned sequence, cross-reference round-tripping is impossible.
Enabling Castor debug shows these responses:
#startElement: secondaryAccession
unable to find FieldDescriptor for 'secondaryAccession' in ClassDescriptor of embl-entry - ignoring extra element.
#characters: M12975-M12977
#endElement: secondaryAccession
#characters:
secondaryAccession field doesn't seem to be in the mapping file, and further more, contractions are used in this example (found quite by chance) - which will need to be interpolated in order to support accession matching.
Enabling Castor debug shows these responses:
#startElement: secondaryAccession
unable to find FieldDescriptor for 'secondaryAccession' in ClassDescriptor of embl-entry - ignoring extra element.
#characters: M12975-M12977
#endElement: secondaryAccession
#characters:
secondaryAccession field doesn't seem to be in the mapping file, and further more, contractions are used in this example (found quite by chance) - which will need to be interpolated in order to support accession matching.
Attachments
Issue Links
- related with
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JAL-2154 Wrong start/end on mapped dataset sequence after reloading project
- Closed