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  1. Jalview
  2. JAL-2027

EMBL parsing of CDS does not respect 'complement()' operator

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Major
    • Resolution: Fixed
    • Affects Version/s: 2.9.0b2
    • Fix Version/s: 2.10.0
    • Component/s: jvdesktop
    • Labels:
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      Description

      Example: EMBL|J03321 has 8 CDS transcripts of which one (AAA91568.1) has
      <location type="single" complement="true">...
      The CDS sequence should be the reverse complement, but it is shown in the forward direction.

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          related with

          Task - A task that needs to be done. JAL-1855 Update to latest version of ENA fetch service

          • Major - Major loss of function.
          • Closed

          Task - A task that needs to be done. JAL-2114 Parse GenBank/ENA location specifiers

          • Major - Major loss of function.
          • Closed

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Dates

                Created:
                Updated:
                Resolved: