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  1. Jalview
  2. JAL-2009

Support for residue insertion codes in PDB data

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      Description

      Each position in a polymer chain in a PDB file is distinguished by its residue number and insertion code. However, the PDBfile parser in Jalview 2.9 ignores residues which only differ by insertion code, and so no mappings are created.

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          New Feature - A new feature of the product, which has yet to be developed. JAL-3238 'Disordered region' secondary structure state

          • Major - Major loss of function.
          • Open
          depends on

          Improvement - An improvement or enhancement to an existing feature or task. JAL-2007 Use PDBe numbering for sequences extracted from PDB files

          • Major - Major loss of function.
          • In Progress
          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-3509 Dragging PDB file on to an alignment turns off feature display

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Closed

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              Assignee:
              jprocter James Procter
              Reporter:
              tcnofoegbu Tochukwu Charles N Ofoegbu
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                Created:
                Updated: