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  1. Jalview
  2. JAL-1856

Better error handling if DBRefFetcher fails

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    Details

    • Type: Improvement
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: 2.8.2
    • Fix Version/s: 2.10.0
    • Component/s: jvdesktop
    • Labels:
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      Description

      If (for example) fetch DB Refs from PDB finds a sequence but is unable to match it to the query sequence, then the dialogue shown is confusing:
      "Your sequences have been verified against known sequence databases. Some of the ids have been
       altered, most likely the start/end residue will have been updated.
       Save your alignment to maintain the updated id.
      1A62 SEQUENCE NOT %100 MATCH "

      The first paragraph should not be shown if no sequence match was made.
      Also the error message is shouty and %100 should be 100%.

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              Assignee:
              gmungoc Mungo Carstairs
              Reporter:
              gmungoc Mungo Carstairs
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                Created:
                Updated:
                Resolved: