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  1. Jalview
  2. JAL-1685

Nucleotide ambiguity codes involving R not recognised

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    Details

    • Type: Bug
    • Status: Closed
    • Priority: Minor
    • Resolution: Fixed
    • Affects Version/s: 2.8.2b1
    • Fix Version/s: 2.9
    • Component/s: na
    • Labels:
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      Description

      'R' represents either A or G. Hence (for example) CAR should translate as Q, but it doesn't.
      Noticed when trying to map cDNA to protein sequences for JAL-845 - causes mapping to fail when CAR is present.

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            Assignee:
            gmungoc Mungo Carstairs
            Reporter:
            gmungoc Mungo Carstairs
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