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  1. Jalview
  2. JAL-1537

relaxed id matches do not associate with all occurences

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    Details

    • Type: Bug
    • Status: In Progress
    • Priority: Blocker
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: file format issue
    • Labels:
      None
    • Urgency:
      Not urgent

      Description

      JAL-753 allowed a sequence ID matcher to be used instead of the exact ID match function when associating features with sequences. This fails in the attached case where there are duplicate IDs.

        Attachments

          Issue Links

          blocks

          Improvement - An improvement or enhancement to an existing feature or task. JAL-942 user preference to allow relaxed ID matching when loading gff and jalview sequence feature files

          • Major - Major loss of function.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1965 case insensitive and word based ID matching for tree, annotation and feature file import

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • Open

          Improvement - An improvement or enhancement to an existing feature or task. JAL-1427 Relaxed reference sequence ID matching when loading annotation files

          • Minor - Minor loss of function, or other problem where easy workaround is present.
          • In Progress
          related with

          Bug - A problem which impairs or prevents the functions of the product. JAL-3195 Relaxed id resolution failing for features files

          • Major - Major loss of function.
          • In Progress

            Activity

              People

              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: