Uploaded image for project: 'Jalview'
  1. Jalview
  2. JAL-1114

standardised API for annotatable groups, alignments, and individual sequences

    XMLWordPrintable

    Details

    • Type: New Feature
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: 3.0
    • Component/s: Datamodel
    • Labels:
      None

      Description

      Much of the code is littered with duplication for working with annotation associated with sequences, groups, and alignments. Method signatures need to be simplified and refactored to form single interfaces for working with collections of sequences, and things that can be annotated.

        Attachments

          Issue Links

            Activity

              People

              Assignee:
              jprocter Jim Procter
              Reporter:
              jprocter Jim Procter
              Votes:
              0 Vote for this issue
              Watchers:
              0 Start watching this issue

                Dates

                Created:
                Updated: