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  1. JABAWS
  2. JWS-36

value for first position in sequence analysis service result is not distinguishable from sequence limits

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.0
    • Fix Version/s: 2.0.1
    • Component/s: jaba-cli
    • Labels:
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      Description

      Currently, output for disorder predictors from jabaws looks like:

      >2jdi_H mol:protein length:146 ATP SYNTHASE DELTA CHAIN
      #COILS 1-870.654 0.286

      The #COILS range is not separated from the first score for that range, meaning anyone writing a parser for the text output must make an assumption about the maximum range of the score in order to separate sequence coordinate (87) from score value (0.654).

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            Assignee:
            pvtroshin Peter Troshin
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: