Details
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Type: Bug
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Status: Resolved
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Priority: Blocker
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Resolution: Fixed
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Affects Version/s: None
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Fix Version/s: None
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Component/s: jabaws-internal
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Labels:
Description
Mafft Jobs aren't being submitted to the cluster successfully - looks like a config issue:
org.ggf.drmaa.DeniedByDrmException: ERROR! -c argument invalid
at com.sun.grid.drmaa.SessionImpl.nativeRunJob(Native Method)
at com.sun.grid.drmaa.SessionImpl.runJob(SessionImpl.java:349)
at compbio.engine.cluster.drmaa.ClusterRunner.submitJob(Unknown Source)
at compbio.engine.cluster.drmaa.AsyncClusterRunner.submitJob(Unknown Source)
at compbio.ws.server.WSUtil.align(Unknown Source)
at compbio.ws.server.MafftWS.align(Unknown Source)
at sun.reflect.GeneratedMethodAccessor182.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)
org.ggf.drmaa.DeniedByDrmException: ERROR! -c argument invalid
at com.sun.grid.drmaa.SessionImpl.nativeRunJob(Native Method)
at com.sun.grid.drmaa.SessionImpl.runJob(SessionImpl.java:349)
at compbio.engine.cluster.drmaa.ClusterRunner.submitJob(Unknown Source)
at compbio.engine.cluster.drmaa.AsyncClusterRunner.submitJob(Unknown Source)
at compbio.ws.server.WSUtil.align(Unknown Source)
at compbio.ws.server.MafftWS.align(Unknown Source)
at sun.reflect.GeneratedMethodAccessor182.invoke(Unknown Source)
at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
at java.lang.reflect.Method.invoke(Method.java:606)