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  1. Jalview
  2. JAL-803

extend PDBFile parameter to allow the contents of the PDB file being associated to be passed to the applet

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      Description

      Extend the PDBFile applet parameter to allows you to do something like :
      <param name="PDBFile1" value="FER1_MAIZE paste:HEADER OXIDOREDUCTASE/ELECTRON TRANSPORT 08-MAY-00 1GAQ
      ATOM 2 CA GLU A 19 20.491 30.713 36.290 1.00 74.29 C
      ATOM 11 CA SER A 20 24.056 29.774 37.264 1.00 72.09 C
      ATOM 17 CA LYS A 21 27.517 31.289 37.563 1.00 70.09 C
      ATOM 26 CA LYS A 22 28.794 27.865 36.481 1.00 68.64 C
      ATOM 35 CA GLN A 23 29.484 26.806 32.884 1.00 70.46 C
      ATOM 44 CA GLU A 24 26.420 25.175 31.360 1.00 72.08 C
      ATOM 53 CA GLU A 25 26.736 26.049 27.683 1.00 70.43 C
      ..
      ">
      to associated raw pdb data to the FER1_MAIZE sequence.

      idea came from request from Jeanre Smit (http://www.compbio.dundee.ac.uk/pipermail/jalview-discuss/2011-March/000569.html)

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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