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  1. Jalview
  2. JAL-714

parser for columnar annotation files like disorder predictions

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    Details

    • Type: New Feature
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: file format issue
    • Labels:
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      Description

      A number of bioinformatics analysis services produce files that look something like :

      # header stuff
      ASEQUENCETHATWASPREDICTEDN
      # some separator
      #optional header
      <position> <residue/base> <Number> <Symbol>

      A new jalview.io parser could be created for this kind of 1D annotation format - enabling data to be directly imported from a number of per-sequence analysis programs.

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              Assignee:
              jprocter James Procter
              Reporter:
              jprocter James Procter
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                Dates

                Created:
                Updated: