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  1. Jalview
  2. JAL-585

dasobert has hard-wired limit of 300 features per sequence

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Minor
    • Resolution: Unresolved
    • Affects Version/s: None
    • Fix Version/s: None
    • Component/s: DAS
    • Labels:
      None

      Description

      load PDB 1GAQ, and then try to retrieve features for this pdb using the RSCB source:

      http://www.rcsb.org/pdb/rest/das/pdbchainfeatures/features?segment=1GAQ

      The following message is output:
      17-Jun-2010 14:22:24 org.biojava.dasobert.das.FeatureThread run
      WARNING: DAS source returned more than 300features. throwing away excess features at http://www.rcsb.org/pdb/rest/das/pdbchainfeatures/features?segment=1GAQ
      Fetching Complete.

      .. and no features are added to the sequence(s).

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: