Details
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Type: New Feature
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Status: Open
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Priority: Major
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Resolution: Unresolved
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Affects Version/s: None
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Fix Version/s: None
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Component/s: Feature Request
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Labels:None
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Mantis ID:61280
Description
Sequence groupings could be highlighted on sequence ID:
e.g.
* write name of group adjacent to each sequence.
* give position of sequence in each group.
See danhitchcock@neo.tamu.edu :
> 5. Allow editting multiple names at once in a sequence. I have a list of GI numbers and their aligned sequences in Jalview and to some gorups i would like to add "1-" or "2-" to all of the seuqneces selected. This could be great for keeping track of which group of sequences are in a group. Ideally the Muscle scoring should keep the groups together but I would prefer to just look at the number.
I may come back to you on this. There's a slight difference between editing sequence names (which I agree calls for some kind of search/replace box with regex capability), and jalview adding additional annotation to the sequence label (like it's position within a sequence group).
e.g.
* write name of group adjacent to each sequence.
* give position of sequence in each group.
See danhitchcock@neo.tamu.edu :
> 5. Allow editting multiple names at once in a sequence. I have a list of GI numbers and their aligned sequences in Jalview and to some gorups i would like to add "1-" or "2-" to all of the seuqneces selected. This could be great for keeping track of which group of sequences are in a group. Ideally the Muscle scoring should keep the groups together but I would prefer to just look at the number.
I may come back to you on this. There's a slight difference between editing sequence names (which I agree calls for some kind of search/replace box with regex capability), and jalview adding additional annotation to the sequence label (like it's position within a sequence group).
Attachments
Issue Links
- related with
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JAL-498 search/replace on sequence IDs
- Open