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  1. Jalview
  2. JAL-4669

Extract RNA base pair info and metadata from loaded structures

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      Description

      Jalview could peek inside imported mmCIF files to look for additional metadata added by tools like FR3D and DNATCO.

      As a starting point, we can look for additional data directly using the Jmol cif parser's internal datamodel:

      cifinfo = getProperty("cifInfo")
      print cifinfo
      print cifinfo.keys
      print cifinfo.models[1].keys
      print cifinfo.models[1]._ndb_base_pair_annotation_id
      print cifinfo.models[1]._ndb_struct_conf_na_feature

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Created:
              Updated: