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  1. Jalview
  2. JAL-4661

Use EBI-AlpafoldDB API lookup to resolve PAE location

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      Description

      JAL-4660 noted several issues with the new AlphaFoldDB multimer dataset - one other aspect is that PAE files are also named in a different way to those previously provided.
      curl -X 'GET' \
        'https://alphafold.ebi.ac.uk/api/prediction/AF-0000000065982887' \
        -H 'accept: application/json'

      is sufficient to retrieve the location of a given entries PAE file as the JSON hash key:

      "paeDocUrl": "https://alphafold.ebi.ac.uk/files/AF-0000000065982887-predicted_aligned_error_v1.json",

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            Assignee:
            jprocter James Procter
            Reporter:
            jprocter James Procter
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              Created:
              Updated: