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  1. Jalview
  2. JAL-4468

Add support for Ensemble Fasta format, used by Muscle5

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    Details

    • Type: New Feature
    • Status: Open
    • Priority: Major
    • Resolution: Unresolved
    • Affects Version/s: 2.11.4.0
    • Fix Version/s: None
    • Component/s: file format issue
    • Labels:
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      Description

      [~j.abbott@dundee.ac.uk] has pointed out that Muscle5 is using a variation of Fasta format to store multiple alignments, each in Fasta format, but in one file.
      It adds a single header line to each alignment (in normal Fasta format) starting with "<" followed by a label for the alignment.
      An official description can be found at
      https://drive5.com/muscle5/manual/efa_file_format.html

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            Assignee:
            jprocter James Procter
            Reporter:
            soares Ben Soares
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              Dates

              Created:
              Updated: