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  1. Jalview
  2. JAL-4011

NPE in CDS/Protein view

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    Details

    • Type: Bug
    • Status: Open
    • Priority: Blocker
    • Resolution: Unresolved
    • Affects Version/s: 2.11.2.2, 2.11.2.3, 2.11.2.4
    • Fix Version/s: None
    • Component/s: renderer, sequencefeatures
    • Labels:

      Description

      Seemed to happen after a new view was created with a couple of CDS sequences and many aligned protein sequences.

      Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
      at jalview.viewmodel.seqfeatures.FeatureRendererModel.findComplementFeaturesAtResidue(FeatureRendererModel.java:1230)
      at jalview.renderer.seqfeatures.FeatureRenderer.drawComplementFeatures(FeatureRenderer.java:465)
      at jalview.renderer.seqfeatures.FeatureRenderer.drawSequence(FeatureRenderer.java:307)
      at jalview.gui.SeqCanvas.draw(SeqCanvas.java:1063)
      at jalview.gui.SeqCanvas.drawPanel(SeqCanvas.java:998)
      at jalview.gui.SeqCanvas.paintComponent(SeqCanvas.java:462)

      and

      Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
      at jalview.viewmodel.seqfeatures.FeatureRendererModel.findComplementFeaturesAtResidue(FeatureRendererModel.java:1230)
      at jalview.gui.SeqPanel.mouseMoved(SeqPanel.java:1127)

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            Assignee:
            Unassigned Unassigned
            Reporter:
            jprocter James Procter
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              Dates

              Created:
              Updated: