[JAL-4011] NPE in CDS/Protein view - Jalview

XML

Word

Printable

Details

Type: Bug
Status: Open
Priority: Blocker
Resolution: Unresolved
Affects Version/s: 2.11.2.2, 2.11.2.3, 2.11.2.4
Fix Version/s: 2.11.3.0, 2.11.3
Component/s: renderer, sequencefeatures
Labels:
- needsreview

Description

Seemed to happen after a new view was created with a couple of CDS sequences and many aligned protein sequences.

Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at jalview.viewmodel.seqfeatures.FeatureRendererModel.findComplementFeaturesAtResidue(FeatureRendererModel.java:1230)
at jalview.renderer.seqfeatures.FeatureRenderer.drawComplementFeatures(FeatureRenderer.java:465)
at jalview.renderer.seqfeatures.FeatureRenderer.drawSequence(FeatureRenderer.java:307)
at jalview.gui.SeqCanvas.draw(SeqCanvas.java:1063)
at jalview.gui.SeqCanvas.drawPanel(SeqCanvas.java:998)
at jalview.gui.SeqCanvas.paintComponent(SeqCanvas.java:462)

and

Exception in thread "AWT-EventQueue-0" java.lang.NullPointerException
at jalview.viewmodel.seqfeatures.FeatureRendererModel.findComplementFeaturesAtResidue(FeatureRendererModel.java:1230)
at jalview.gui.SeqPanel.mouseMoved(SeqPanel.java:1127)

Attachments

Activity

People

Assignee:: James Procter

Reporter:: James Procter

Votes:: 0 Vote for this issue

Watchers:: 1 Start watching this issue

Dates

Created:: 11/May/22 1:01 PM

Updated:: 03/Feb/23 3:40 PM