Details
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Type:
Improvement
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Status: Open
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Priority:
Critical
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Resolution: Unresolved
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Affects Version/s: 2.11.2
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Fix Version/s: 2.11.3
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Component/s: Structures
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Labels:None
Description
Import the following:
>1QCF/80-136
IIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD
With SIFTS mappings enabled, Jalview will resolve the sequence's ID against Ensembl *after* the 'view'/'add' button on the structure chooser is pressed. In fact, it succeeds, but the Ensembl query takes several seconds, to no reasonable added value (whilst cross references are added, the cross-ref mechanism doesn't quite work correctly either..).
Need to limit the DB discovery for sifts, and create a follow on issue for problems with resolving 1QCF against Ensembl.
>1QCF/80-136
IIVVALYDYEAIHHEDLSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVD
With SIFTS mappings enabled, Jalview will resolve the sequence's ID against Ensembl *after* the 'view'/'add' button on the structure chooser is pressed. In fact, it succeeds, but the Ensembl query takes several seconds, to no reasonable added value (whilst cross references are added, the cross-ref mechanism doesn't quite work correctly either..).
Need to limit the DB discovery for sifts, and create a follow on issue for problems with resolving 1QCF against Ensembl.